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Hi @abridgland - I have a question in connection to your last reply. Indeed, I saw on the Colab notebook you run the monomer models and model_2_ptm to obtain the predicted alined error. I thus far used the monomer_ptm to obtain ptm for each model, and I wonder why one would only run a single model? Would you advice to run regular monomer to obtain the 'best' model was these have been validated and then the corresponding (let's say model 1 had the highest average pLDDT) ptm model to obtain the estimates, or would you always use model_2_ptm, and if so, why? Thanks a lot for your answer
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